../../tmp/servers/virsirnadb/1960374172
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2034 | 1 | caggagcacctataccaac | 19 | |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 2769 | ................... | 2787 | 100 |
| DQ473510.1 | Human rhinovirus 75, complete genome | 2773 | ..........a........ | 2791 | 94 |
| FJ445118.1 | Human rhinovirus 18 strain ATCC VR-1128, complete genome | 2758 | ..........a......._ | 2775 | 89 |
| FJ445149.1 | Human rhinovirus 67 strain ATCC VR-1177, complete genome | 2767 | ..........at....... | 2785 | 89 |
| FJ445157.1 | Human rhinovirus 81 strain ATCC VR-1191, complete genome | 2761 | ..........c..t..... | 2779 | 89 |
| DQ473494.1 | Human rhinovirus 74, complete genome | 2766 | ...........t....c._ | 2783 | 84 |
| EF173418.1 | Human rhinovirus 78, complete genome | 2784 | .t.....c.........._ | 2801 | 84 |
| FJ445114.1 | Human rhinovirus 9 isolate F01, complete genome | 2769 | ..........cc......_ | 2786 | 84 |
| FJ445115.1 | Human rhinovirus 9 isolate F02, complete genome | 2768 | ..........cc......_ | 2785 | 84 |
| FJ445142.1 | Human rhinovirus 58 strain ATCC VR-1168, complete genome | 2783 | ...........g....c._ | 2800 | 84 |
| FJ445183.1 | Human rhinovirus 78 strain ATCC VR-1188, complete genome | 2784 | .t.....c.........._ | 2801 | 84 |
| FJ445143.1 | Human rhinovirus 60 strain ATCC VR-1473, complete genome | 2769 | ..........at....t.. | 2787 | 84 |
| EF173423.1 | Human rhinovirus 37, complete genome | 2795 | ..........a.at...._ | 2812 | 78 |
| FJ445172.1 | Human rhinovirus 97 strain ATCC VR-1297, complete genome | 2787 | ..........c.ac...._ | 2804 | 78 |
| FJ445172.1 | Human rhinovirus 97 strain ATCC VR-1297, complete genome | 2016 | .........._________ | 2025 | 52 |
| M16248.1 | HRV89 Human rhinovirus type 89 (HRV89), complete genome | 2795 | ...........g.c..___ | 2810 | 73 |
| FJ445132.1 | Human rhinovirus 45 strain ATCC VR-1155, complete genome | 2756 | ...........c.c..___ | 2771 | 73 |
| FJ445165.1 | Human rhinovirus 89 isolate F09, complete genome | 2793 | ...........g.c..___ | 2808 | 73 |
| FJ445166.1 | Human rhinovirus 89 isolate F08, complete genome | 2795 | ...........g.c..___ | 2810 | 73 |
| FJ445184.1 | Human rhinovirus 89 strain ATCC VR-1199, complete genome | 2795 | ...........g.c..___ | 2810 | 73 |
| NC_001617.1 | Human rhinovirus 89, complete genome | 2795 | ...........g.c..___ | 2810 | 73 |
| EF173421.1 | Human rhinovirus 27, complete genome | 2021 | ..........agg...t.. | 2039 | 78 |
| EF173421.1 | Human rhinovirus 27, complete genome | 2792 | ..........a.ac...__ | 2808 | 73 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 2801 | ..........c.at..c.. | 2819 | 78 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 214 | ___..c..........___ | 202 | 63 |
| FJ445186.1 | Human rhinovirus 27 strain ATCC VR-1137, complete genome | 2021 | ..........agg...t.. | 2039 | 78 |
| FJ445186.1 | Human rhinovirus 27 strain ATCC VR-1137, complete genome | 2792 | ..........a.ac...__ | 2808 | 73 |
| FJ445113.1 | Human rhinovirus 8 strain ATCC VR-1118, complete genome | 2003 | ..........aga...c.. | 2021 | 78 |
| FJ445170.1 | Human rhinovirus 95 strain ATCC VR-1301, complete genome | 2005 | ..........aga...c.. | 2023 | 78 |
| FJ445124.1 | Human rhinovirus 26 strain ATCC VR-1136, complete genome | 2788 | ..........a.at...__ | 2804 | 73 |
| FJ445156.1 | Human rhinovirus 80 strain ATCC VR-1190, complete genome | 3077 | ..a.........g.g..__ | 3093 | 73 |
| FJ445112.1 | Human rhinovirus 5 strain ATCC VR-485, complete genome | 3332 | ..t..........______ | 3320 | 63 |
| FJ445112.1 | Human rhinovirus 5 strain ATCC VR-485, complete genome | 2019 | .........aaggc..... | 2037 | 73 |
| FJ445164.1 | Human rhinovirus 86 strain ATCC VR-1196, complete genome | 2796 | ..........c.at..t._ | 2813 | 73 |
| FJ445164.1 | Human rhinovirus 86 strain ATCC VR-1196, complete genome | 3327 | .........a.gg.g..__ | 3343 | 68 |
| FJ445119.1 | Human rhinovirus 19 strain ATCC VR-1129, complete genome | 6030 | ..a..c.ct........._ | 6013 | 73 |
| FJ445131.1 | Human rhinovirus 43 strain ATCC VR-1153, complete genome | 6029 | ..a..c.tt........._ | 6012 | 73 |
| DQ473485.1 | Human rhinovirus 3, complete genome | 3091 | ..a.........g.g.___ | 3106 | 68 |
| DQ473487.1 | Human rhinovirus 35, complete genome | 2028 | .t.........gg...___ | 2043 | 68 |
| EF173422.1 | Human rhinovirus 3, complete genome | 3091 | ..a.........g.g.___ | 3106 | 68 |
| FJ445187.1 | Human rhinovirus 35 strain ATCC VR-1145, complete genome | 2028 | .t.........gg...___ | 2043 | 68 |
| FJ445121.1 | Human rhinovirus 21 strain ATCC VR-1131, complete genome | 2306 | _.a.t.........a..__ | 2321 | 68 |
| FJ445153.1 | Human rhinovirus 72 strain ATCC VR-1182, complete genome | 221 | __.t.c..........___ | 208 | 63 |
| EF173414.1 | Human rhinovirus 11, complete genome | 6015 | ____.c..t........._ | 6002 | 63 |
| DQ473488.1 | Human rhinovirus 48, complete genome | 2153 | _______..........__ | 2162 | 52 |
| EF173420.1 | Human rhinovirus 17, complete genome | 807 | _..........________ | 816 | 52 |
| FJ445168.1 | Human rhinovirus 91 strain ATCC VR-1292, complete genome | 809 | _..........________ | 818 | 52 |
| FJ445160.1 | Human rhinovirus 82 strain ATCC VR-1192, complete genome | 2768 | _..........________ | 2759 | 52 |
| FJ445130.1 | Human rhinovirus 42 strain ATCC VR-338, complete genome | 821 | _.........agc..t.._ | 837 | 68 |